Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.94□□□□□ -0.18
NDUFA1O15239 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 BX842568.3-201ENST00000418104 571 ntBASIC13.94□□□□□ -0.18
NDUFA1O15239 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NDUFA1O15239 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 AC116562.4-201ENST00000641316 2276 ntBASIC13.94□□□□□ -0.18
NDUFA1O15239 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
NDUFA1O15239 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.94□□□□□ -0.18
NDUFA1O15239 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 AC126544.1-201ENST00000580842 1059 ntBASIC13.93□□□□□ -0.18
NDUFA1O15239 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.93□□□□□ -0.18
NDUFA1O15239 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NDUFA1O15239 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NDUFA1O15239 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 AC098818.2-201ENST00000564925 2320 ntBASIC13.92□□□□□ -0.18
NDUFA1O15239 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
NDUFA1O15239 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.92□□□□□ -0.18
NDUFA1O15239 TCF3P1-201ENST00000423021 1937 ntBASIC13.92□□□□□ -0.18
NDUFA1O15239 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NDUFA1O15239 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NDUFA1O15239 MIR4767-201ENST00000582827 78 ntBASIC13.92□□□□□ -0.18
NDUFA1O15239 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.92□□□□□ -0.18
NDUFA1O15239 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NDUFA1O15239 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NDUFA1O15239 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NDUFA1O15239 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NDUFA1O15239 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NDUFA1O15239 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.91□□□□□ -0.18
NDUFA1O15239 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 AC233992.3-201ENST00000607491 485 ntBASIC13.91□□□□□ -0.18
NDUFA1O15239 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.91□□□□□ -0.18
NDUFA1O15239 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NDUFA1O15239 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms