Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA3F8WFD2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA3F8WFD2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 AL589743.5-201ENST00000616611 1050 ntBASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 AF106564.1-201ENST00000607058 2553 ntBASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 AL049796.1-201ENST00000565336 1766 ntBASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NPIPA3F8WFD2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CLDN5-201ENST00000403084 2357 ntBASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA3F8WFD2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 KRT18P68-201ENST00000392293 1000 ntBASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA3F8WFD2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 PRORSD1P-201ENST00000295112 541 ntBASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 AC116050.2-201ENST00000612102 1779 ntBASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA3F8WFD2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms