Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LOC285556D6RIA3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.6■■□□□ 1.37
LOC285556D6RIA3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 AL390719.1-204ENST00000412397 1219 ntBASIC23.59■■□□□ 1.37
LOC285556D6RIA3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 AC010331.1-201ENST00000611423 582 ntBASIC23.59■■□□□ 1.37
LOC285556D6RIA3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LOC285556D6RIA3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LOC285556D6RIA3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LOC285556D6RIA3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LOC285556D6RIA3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.58■■□□□ 1.36
LOC285556D6RIA3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LOC285556D6RIA3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 KRT17P2-201ENST00000300992 1314 ntBASIC23.57■■□□□ 1.36
LOC285556D6RIA3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LOC285556D6RIA3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 AP001412.1-201ENST00000608405 714 ntBASIC23.56■■□□□ 1.36
LOC285556D6RIA3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LOC285556D6RIA3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
LOC285556D6RIA3 MIR1224-201ENST00000408193 85 ntBASIC23.55■■□□□ 1.36
LOC285556D6RIA3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.55■■□□□ 1.36
LOC285556D6RIA3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms