Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 ITM2C-210ENST00000620962 501 ntBASIC21.1■□□□□ 0.97
SRRM3A6NNA2 AC105233.4-201ENST00000642045 216 ntBASIC21.1■□□□□ 0.97
SRRM3A6NNA2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.1■□□□□ 0.97
SRRM3A6NNA2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.09■□□□□ 0.97
SRRM3A6NNA2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 KRT18P29-201ENST00000397031 1267 ntBASIC21.09■□□□□ 0.97
SRRM3A6NNA2 AC079089.2-201ENST00000531211 1277 ntBASIC21.09■□□□□ 0.97
SRRM3A6NNA2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.09■□□□□ 0.97
SRRM3A6NNA2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 KRT19P1-201ENST00000405746 1186 ntBASIC21.08■□□□□ 0.97
SRRM3A6NNA2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.08■□□□□ 0.97
SRRM3A6NNA2 KRT18P11-201ENST00000435214 1283 ntBASIC21.08■□□□□ 0.97
SRRM3A6NNA2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 AC098818.2-201ENST00000564925 2320 ntBASIC21.08■□□□□ 0.97
SRRM3A6NNA2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.08■□□□□ 0.97
SRRM3A6NNA2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRRM3A6NNA2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 PCDHAC2-203ENST00000615316 3011 ntBASIC21.07■□□□□ 0.96
SRRM3A6NNA2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 GUSBP6-202ENST00000438529 1198 ntBASIC21.07■□□□□ 0.96
SRRM3A6NNA2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 AL050303.2-201ENST00000619798 666 ntBASIC21.07■□□□□ 0.96
SRRM3A6NNA2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.07■□□□□ 0.96
SRRM3A6NNA2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SRRM3A6NNA2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms