Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC053503.5-201ENST00000601508 636 ntBASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF103-CHMP3A0A140T963 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 PLK5-205ENST00000642079 1969 ntBASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF103-CHMP3A0A140T963 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF103-CHMP3A0A140T963 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF103-CHMP3A0A140T963 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 AC105265.2-201ENST00000467189 838 ntBASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 AC005837.3-201ENST00000612163 286 ntBASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF103-CHMP3A0A140T963 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 AC079140.4-201ENST00000507448 529 ntBASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RNF103-CHMP3A0A140T963 AC121338.2-201ENST00000622535 1744 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms