Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PNMA6EA0A0J9YXQ4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AC073314.1-201ENST00000568729 2216 ntBASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AC092118.2-201ENST00000613495 667 ntBASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA6EA0A0J9YXQ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 LSM12P1-201ENST00000411836 588 ntBASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AL589743.5-201ENST00000616611 1050 ntBASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PNMA6EA0A0J9YXQ4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FEM1AP1-201ENST00000431297 1995 ntBASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 DUSP5P2-201ENST00000426873 1033 ntBASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PNMA6EA0A0J9YXQ4 MYC-209ENST00000641252 345 ntBASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms