Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 AC069544.1-201ENST00000609399 999 ntBASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 AL359736.2-201ENST00000621992 437 ntBASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV19A0A0A6YYK7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 C1QBPP2-201ENST00000528754 825 ntBASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 FAM197Y4-202ENST00000622692 608 ntBASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV19A0A0A6YYK7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 UBE2SP1-201ENST00000450587 669 ntBASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 AC005829.2-201ENST00000571422 1056 ntBASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 AC233263.1-201ENST00000578059 224 ntBASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 RN7SL471P-201ENST00000580476 299 ntBASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV19A0A0A6YYK7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 RPPH1-201ENST00000516869 333 ntBASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV19A0A0A6YYK7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV19A0A0A6YYK7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV19A0A0A6YYK7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.14■□□□□ 0.98
TRAV19A0A0A6YYK7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 AL390719.1-204ENST00000412397 1219 ntBASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 AC027702.1-201ENST00000563810 1770 ntBASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TRAV19A0A0A6YYK7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 RPS2P4-201ENST00000476944 856 ntBASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.13■□□□□ 0.97
TRAV19A0A0A6YYK7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms