Protein–RNA interactions for Protein: Q9R1C8

Htr6, 5-hydroxytryptamine receptor 6, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htr6Q9R1C8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Htr6Q9R1C8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Htr6Q9R1C8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Htr6Q9R1C8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Htr6Q9R1C8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.96■□□□□ 0.95
Htr6Q9R1C8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.96■□□□□ 0.95
Htr6Q9R1C8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Htr6Q9R1C8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Htr6Q9R1C8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Htr6Q9R1C8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Htr6Q9R1C8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Htr6Q9R1C8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Htr6Q9R1C8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Htr6Q9R1C8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Htr6Q9R1C8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Htr6Q9R1C8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Htr6Q9R1C8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.92■□□□□ 0.94
Htr6Q9R1C8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Htr6Q9R1C8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Htr6Q9R1C8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Htr6Q9R1C8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.89■□□□□ 0.93
Htr6Q9R1C8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Htr6Q9R1C8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Htr6Q9R1C8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Htr6Q9R1C8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Htr6Q9R1C8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Htr6Q9R1C8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Htr6Q9R1C8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Htr6Q9R1C8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Htr6Q9R1C8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Htr6Q9R1C8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Htr6Q9R1C8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Htr6Q9R1C8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Htr6Q9R1C8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htr6Q9R1C8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Htr6Q9R1C8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Htr6Q9R1C8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Htr6Q9R1C8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Htr6Q9R1C8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Htr6Q9R1C8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Htr6Q9R1C8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.81■□□□□ 0.92
Htr6Q9R1C8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Htr6Q9R1C8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Htr6Q9R1C8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htr6Q9R1C8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htr6Q9R1C8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htr6Q9R1C8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Htr6Q9R1C8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htr6Q9R1C8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htr6Q9R1C8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Htr6Q9R1C8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Htr6Q9R1C8 Gm16148-201ENSMUST00000119653 893 ntBASIC20.77■□□□□ 0.92
Htr6Q9R1C8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Htr6Q9R1C8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.76■□□□□ 0.91
Htr6Q9R1C8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htr6Q9R1C8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htr6Q9R1C8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.73■□□□□ 0.91
Htr6Q9R1C8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Htr6Q9R1C8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Htr6Q9R1C8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Htr6Q9R1C8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Htr6Q9R1C8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.72■□□□□ 0.91
Htr6Q9R1C8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Htr6Q9R1C8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Htr6Q9R1C8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Htr6Q9R1C8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Htr6Q9R1C8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Htr6Q9R1C8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Htr6Q9R1C8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Htr6Q9R1C8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.7■□□□□ 0.9
Htr6Q9R1C8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htr6Q9R1C8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htr6Q9R1C8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Htr6Q9R1C8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Htr6Q9R1C8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Htr6Q9R1C8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Htr6Q9R1C8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Htr6Q9R1C8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Htr6Q9R1C8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.64■□□□□ 0.89
Htr6Q9R1C8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Htr6Q9R1C8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Htr6Q9R1C8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Htr6Q9R1C8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Htr6Q9R1C8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms