Protein–RNA interactions for Protein: Q9JM61

Thsd1, Thrombospondin type-1 domain-containing protein 1, mousemouse

Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd1Q9JM61 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Thsd1Q9JM61 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.35■■□□□ 1.17
Thsd1Q9JM61 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.34■■□□□ 1.17
Thsd1Q9JM61 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Thsd1Q9JM61 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
Thsd1Q9JM61 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Thsd1Q9JM61 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Thsd1Q9JM61 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Thsd1Q9JM61 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Thsd1Q9JM61 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.33■■□□□ 1.17
Thsd1Q9JM61 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Thsd1Q9JM61 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Thsd1Q9JM61 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Thsd1Q9JM61 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Thsd1Q9JM61 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Thsd1Q9JM61 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Thsd1Q9JM61 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Thsd1Q9JM61 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Thsd1Q9JM61 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Thsd1Q9JM61 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Thsd1Q9JM61 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
Thsd1Q9JM61 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Thsd1Q9JM61 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Thsd1Q9JM61 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Thsd1Q9JM61 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.28■■□□□ 1.16
Thsd1Q9JM61 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Thsd1Q9JM61 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Thsd1Q9JM61 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Thsd1Q9JM61 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Thsd1Q9JM61 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Thsd1Q9JM61 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Thsd1Q9JM61 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.25■■□□□ 1.15
Thsd1Q9JM61 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Thsd1Q9JM61 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Thsd1Q9JM61 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Thsd1Q9JM61 Nkain2-201ENSMUST00000092602 558 ntBASIC22.24■■□□□ 1.15
Thsd1Q9JM61 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.24■■□□□ 1.15
Thsd1Q9JM61 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Thsd1Q9JM61 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Thsd1Q9JM61 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Thsd1Q9JM61 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Thsd1Q9JM61 Gm7432-201ENSMUST00000210343 879 ntBASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Thsd1Q9JM61 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Thsd1Q9JM61 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.2■■□□□ 1.14
Thsd1Q9JM61 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Thsd1Q9JM61 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.19■■□□□ 1.14
Thsd1Q9JM61 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Thsd1Q9JM61 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.19■■□□□ 1.14
Thsd1Q9JM61 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Thsd1Q9JM61 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Thsd1Q9JM61 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Thsd1Q9JM61 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Thsd1Q9JM61 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Thsd1Q9JM61 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Thsd1Q9JM61 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.17■■□□□ 1.14
Thsd1Q9JM61 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Thsd1Q9JM61 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Thsd1Q9JM61 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.16■■□□□ 1.14
Thsd1Q9JM61 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Thsd1Q9JM61 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Thsd1Q9JM61 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.15■■□□□ 1.14
Thsd1Q9JM61 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Thsd1Q9JM61 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Thsd1Q9JM61 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Thsd1Q9JM61 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Thsd1Q9JM61 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Thsd1Q9JM61 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Thsd1Q9JM61 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Thsd1Q9JM61 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Thsd1Q9JM61 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Thsd1Q9JM61 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.12■■□□□ 1.13
Thsd1Q9JM61 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.11■■□□□ 1.13
Thsd1Q9JM61 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Thsd1Q9JM61 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Thsd1Q9JM61 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Thsd1Q9JM61 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Thsd1Q9JM61 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Thsd1Q9JM61 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.1■■□□□ 1.13
Thsd1Q9JM61 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Thsd1Q9JM61 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Thsd1Q9JM61 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Thsd1Q9JM61 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.08■■□□□ 1.12
Thsd1Q9JM61 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Thsd1Q9JM61 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Thsd1Q9JM61 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms