Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Raet1eQ9CZQ6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Raet1eQ9CZQ6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raet1eQ9CZQ6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raet1eQ9CZQ6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raet1eQ9CZQ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Raet1eQ9CZQ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.34■■□□□ 1.01
Raet1eQ9CZQ6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Raet1eQ9CZQ6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Raet1eQ9CZQ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raet1eQ9CZQ6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Raet1eQ9CZQ6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raet1eQ9CZQ6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raet1eQ9CZQ6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Raet1eQ9CZQ6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Raet1eQ9CZQ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Raet1eQ9CZQ6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Raet1eQ9CZQ6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Raet1eQ9CZQ6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Raet1eQ9CZQ6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Raet1eQ9CZQ6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Raet1eQ9CZQ6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Raet1eQ9CZQ6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Raet1eQ9CZQ6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raet1eQ9CZQ6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raet1eQ9CZQ6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raet1eQ9CZQ6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Raet1eQ9CZQ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Raet1eQ9CZQ6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Raet1eQ9CZQ6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Raet1eQ9CZQ6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raet1eQ9CZQ6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raet1eQ9CZQ6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raet1eQ9CZQ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Raet1eQ9CZQ6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1eQ9CZQ6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1eQ9CZQ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.22■□□□□ 0.99
Raet1eQ9CZQ6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raet1eQ9CZQ6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1eQ9CZQ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Raet1eQ9CZQ6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.19■□□□□ 0.98
Raet1eQ9CZQ6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raet1eQ9CZQ6 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.18■□□□□ 0.98
Raet1eQ9CZQ6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Raet1eQ9CZQ6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Raet1eQ9CZQ6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.17■□□□□ 0.98
Raet1eQ9CZQ6 Gm27322-201ENSMUST00000184007 104 ntBASIC21.17■□□□□ 0.98
Raet1eQ9CZQ6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Raet1eQ9CZQ6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Raet1eQ9CZQ6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Raet1eQ9CZQ6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raet1eQ9CZQ6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1eQ9CZQ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Raet1eQ9CZQ6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.15■□□□□ 0.98
Raet1eQ9CZQ6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.14■□□□□ 0.97
Raet1eQ9CZQ6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1eQ9CZQ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.14■□□□□ 0.97
Raet1eQ9CZQ6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Raet1eQ9CZQ6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raet1eQ9CZQ6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
Raet1eQ9CZQ6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Raet1eQ9CZQ6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1eQ9CZQ6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1eQ9CZQ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1eQ9CZQ6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1eQ9CZQ6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1eQ9CZQ6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1eQ9CZQ6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1eQ9CZQ6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1eQ9CZQ6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1eQ9CZQ6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Raet1eQ9CZQ6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Raet1eQ9CZQ6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1eQ9CZQ6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1eQ9CZQ6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1eQ9CZQ6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1eQ9CZQ6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1eQ9CZQ6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1eQ9CZQ6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1eQ9CZQ6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1eQ9CZQ6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1eQ9CZQ6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1eQ9CZQ6 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.03■□□□□ 0.96
Raet1eQ9CZQ6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms