Protein–RNA interactions for Protein: Q8QZS5

Rnf183, Probable E3 ubiquitin-protein ligase RNF183, mousemouse

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf183Q8QZS5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Nkain2-201ENSMUST00000092602 558 ntBASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf183Q8QZS5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rnf183Q8QZS5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf183Q8QZS5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf183Q8QZS5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.71■□□□□ 0.59
Rnf183Q8QZS5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf183Q8QZS5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf183Q8QZS5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf183Q8QZS5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf183Q8QZS5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf183Q8QZS5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf183Q8QZS5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.69■□□□□ 0.58
Rnf183Q8QZS5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Rnf183Q8QZS5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf183Q8QZS5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf183Q8QZS5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.67■□□□□ 0.58
Rnf183Q8QZS5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf183Q8QZS5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf183Q8QZS5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf183Q8QZS5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.63■□□□□ 0.57
Rnf183Q8QZS5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf183Q8QZS5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf183Q8QZS5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf183Q8QZS5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf183Q8QZS5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf183Q8QZS5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf183Q8QZS5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf183Q8QZS5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf183Q8QZS5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.61■□□□□ 0.57
Rnf183Q8QZS5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf183Q8QZS5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf183Q8QZS5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf183Q8QZS5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf183Q8QZS5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf183Q8QZS5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf183Q8QZS5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf183Q8QZS5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf183Q8QZS5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf183Q8QZS5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf183Q8QZS5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf183Q8QZS5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf183Q8QZS5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf183Q8QZS5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf183Q8QZS5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf183Q8QZS5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf183Q8QZS5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf183Q8QZS5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Rnf183Q8QZS5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf183Q8QZS5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf183Q8QZS5 Zxda-201ENSMUST00000117281 2621 ntBASIC18.55■□□□□ 0.56
Rnf183Q8QZS5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf183Q8QZS5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf183Q8QZS5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf183Q8QZS5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf183Q8QZS5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf183Q8QZS5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf183Q8QZS5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rnf183Q8QZS5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf183Q8QZS5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf183Q8QZS5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf183Q8QZS5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf183Q8QZS5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf183Q8QZS5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rnf183Q8QZS5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf183Q8QZS5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf183Q8QZS5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf183Q8QZS5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf183Q8QZS5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf183Q8QZS5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf183Q8QZS5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf183Q8QZS5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf183Q8QZS5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf183Q8QZS5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf183Q8QZS5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf183Q8QZS5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf183Q8QZS5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf183Q8QZS5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms