Protein–RNA interactions for Protein: Q8C3L1

Ssuh2, Protein SSUH2 homolog, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssuh2Q8C3L1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22,32■■□□□ 1,16
Ssuh2Q8C3L1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22,31■■□□□ 1,16
Ssuh2Q8C3L1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22,31■■□□□ 1,16
Ssuh2Q8C3L1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22,31■■□□□ 1,16
Ssuh2Q8C3L1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Ssuh2Q8C3L1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Ssuh2Q8C3L1 Gm7432-201ENSMUST00000210343 879 ntBASIC22,3■■□□□ 1,16
Ssuh2Q8C3L1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Ssuh2Q8C3L1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22,29■■□□□ 1,16
Ssuh2Q8C3L1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Ssuh2Q8C3L1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22,28■■□□□ 1,16
Ssuh2Q8C3L1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22,28■■□□□ 1,16
Ssuh2Q8C3L1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22,27■■□□□ 1,16
Ssuh2Q8C3L1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22,27■■□□□ 1,16
Ssuh2Q8C3L1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22,27■■□□□ 1,16
Ssuh2Q8C3L1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22,27■■□□□ 1,16
Ssuh2Q8C3L1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22,26■■□□□ 1,15
Ssuh2Q8C3L1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22,25■■□□□ 1,15
Ssuh2Q8C3L1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22,24■■□□□ 1,15
Ssuh2Q8C3L1 Mir6538-201ENSMUST00000183713 110 ntBASIC22,24■■□□□ 1,15
Ssuh2Q8C3L1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22,24■■□□□ 1,15
Ssuh2Q8C3L1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
Ssuh2Q8C3L1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Ssuh2Q8C3L1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22,21■■□□□ 1,15
Ssuh2Q8C3L1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Ssuh2Q8C3L1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Ssuh2Q8C3L1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Ssuh2Q8C3L1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Ssuh2Q8C3L1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Ssuh2Q8C3L1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Ssuh2Q8C3L1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22,19■■□□□ 1,14
Ssuh2Q8C3L1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22,19■■□□□ 1,14
Ssuh2Q8C3L1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Ssuh2Q8C3L1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22,18■■□□□ 1,14
Ssuh2Q8C3L1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22,17■■□□□ 1,14
Ssuh2Q8C3L1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22,17■■□□□ 1,14
Ssuh2Q8C3L1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 AC157572.2-201ENSMUST00000226970 908 ntBASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22,16■■□□□ 1,14
Ssuh2Q8C3L1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22,15■■□□□ 1,14
Ssuh2Q8C3L1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Ssuh2Q8C3L1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22,14■■□□□ 1,14
Ssuh2Q8C3L1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Ssuh2Q8C3L1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22,13■■□□□ 1,13
Ssuh2Q8C3L1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22,13■■□□□ 1,13
Ssuh2Q8C3L1 Nkain2-201ENSMUST00000092602 558 ntBASIC22,12■■□□□ 1,13
Ssuh2Q8C3L1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22,12■■□□□ 1,13
Ssuh2Q8C3L1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22,1■■□□□ 1,13
Ssuh2Q8C3L1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Ssuh2Q8C3L1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22,09■■□□□ 1,13
Ssuh2Q8C3L1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Ssuh2Q8C3L1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22,08■■□□□ 1,13
Ssuh2Q8C3L1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22,08■■□□□ 1,13
Ssuh2Q8C3L1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22,08■■□□□ 1,13
Ssuh2Q8C3L1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22,08■■□□□ 1,13
Ssuh2Q8C3L1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22,08■■□□□ 1,13
Ssuh2Q8C3L1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,08■■□□□ 1,12
Ssuh2Q8C3L1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22,08■■□□□ 1,12
Ssuh2Q8C3L1 Gm6345-201ENSMUST00000180378 1691 ntBASIC22,07■■□□□ 1,12
Ssuh2Q8C3L1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22,07■■□□□ 1,12
Ssuh2Q8C3L1 Gm11599-201ENSMUST00000118720 878 ntBASIC22,07■■□□□ 1,12
Ssuh2Q8C3L1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22,07■■□□□ 1,12
Ssuh2Q8C3L1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Ssuh2Q8C3L1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 Cap2-205ENSMUST00000225824 1634 ntBASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 Gm11175-201ENSMUST00000116172 543 ntBASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Ssuh2Q8C3L1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Ssuh2Q8C3L1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22,05■■□□□ 1,12
Ssuh2Q8C3L1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22,05■■□□□ 1,12
Ssuh2Q8C3L1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Ssuh2Q8C3L1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22,04■■□□□ 1,12
Ssuh2Q8C3L1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22,04■■□□□ 1,12
Ssuh2Q8C3L1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22,03■■□□□ 1,12
Ssuh2Q8C3L1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22,03■■□□□ 1,12
Ssuh2Q8C3L1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Ssuh2Q8C3L1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22,03■■□□□ 1,12
Ssuh2Q8C3L1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Ssuh2Q8C3L1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22,02■■□□□ 1,12
Ssuh2Q8C3L1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Ssuh2Q8C3L1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Ssuh2Q8C3L1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,11
Ssuh2Q8C3L1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22,01■■□□□ 1,11
Ssuh2Q8C3L1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22,01■■□□□ 1,11
Ssuh2Q8C3L1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21,99■■□□□ 1,11
Ssuh2Q8C3L1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Ssuh2Q8C3L1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Ssuh2Q8C3L1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21,98■■□□□ 1,11
Ssuh2Q8C3L1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21,98■■□□□ 1,11
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms