Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cdk5rap1Q8BTW8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdk5rap1Q8BTW8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.29■■□□□ 1.32
Cdk5rap1Q8BTW8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Cdk5rap1Q8BTW8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Cdk5rap1Q8BTW8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdk5rap1Q8BTW8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdk5rap1Q8BTW8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdk5rap1Q8BTW8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdk5rap1Q8BTW8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdk5rap1Q8BTW8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdk5rap1Q8BTW8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cdk5rap1Q8BTW8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.23■■□□□ 1.31
Cdk5rap1Q8BTW8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdk5rap1Q8BTW8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cdk5rap1Q8BTW8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdk5rap1Q8BTW8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.22■■□□□ 1.31
Cdk5rap1Q8BTW8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cdk5rap1Q8BTW8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdk5rap1Q8BTW8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdk5rap1Q8BTW8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.2■■□□□ 1.3
Cdk5rap1Q8BTW8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cdk5rap1Q8BTW8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdk5rap1Q8BTW8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdk5rap1Q8BTW8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.19■■□□□ 1.3
Cdk5rap1Q8BTW8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdk5rap1Q8BTW8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cdk5rap1Q8BTW8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.17■■□□□ 1.3
Cdk5rap1Q8BTW8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdk5rap1Q8BTW8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cdk5rap1Q8BTW8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.16■■□□□ 1.3
Cdk5rap1Q8BTW8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdk5rap1Q8BTW8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.15■■□□□ 1.3
Cdk5rap1Q8BTW8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cdk5rap1Q8BTW8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.29
Cdk5rap1Q8BTW8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.14■■□□□ 1.29
Cdk5rap1Q8BTW8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdk5rap1Q8BTW8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdk5rap1Q8BTW8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdk5rap1Q8BTW8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdk5rap1Q8BTW8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Cdk5rap1Q8BTW8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Cdk5rap1Q8BTW8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdk5rap1Q8BTW8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdk5rap1Q8BTW8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdk5rap1Q8BTW8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdk5rap1Q8BTW8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Cdk5rap1Q8BTW8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Cdk5rap1Q8BTW8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdk5rap1Q8BTW8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Cdk5rap1Q8BTW8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Cdk5rap1Q8BTW8 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.06■■□□□ 1.28
Cdk5rap1Q8BTW8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cdk5rap1Q8BTW8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cdk5rap1Q8BTW8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cdk5rap1Q8BTW8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cdk5rap1Q8BTW8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.05■■□□□ 1.28
Cdk5rap1Q8BTW8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.04■■□□□ 1.28
Cdk5rap1Q8BTW8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Cdk5rap1Q8BTW8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Cdk5rap1Q8BTW8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cdk5rap1Q8BTW8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdk5rap1Q8BTW8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cdk5rap1Q8BTW8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdk5rap1Q8BTW8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdk5rap1Q8BTW8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdk5rap1Q8BTW8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cdk5rap1Q8BTW8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23■■□□□ 1.27
Cdk5rap1Q8BTW8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Cdk5rap1Q8BTW8 Zxda-201ENSMUST00000117281 2621 ntBASIC23■■□□□ 1.27
Cdk5rap1Q8BTW8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23■■□□□ 1.27
Cdk5rap1Q8BTW8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cdk5rap1Q8BTW8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Cdk5rap1Q8BTW8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Gm7432-201ENSMUST00000210343 879 ntBASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.98■■□□□ 1.27
Cdk5rap1Q8BTW8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cdk5rap1Q8BTW8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdk5rap1Q8BTW8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdk5rap1Q8BTW8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.96■■□□□ 1.27
Cdk5rap1Q8BTW8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.95■■□□□ 1.26
Cdk5rap1Q8BTW8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.95■■□□□ 1.26
Cdk5rap1Q8BTW8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdk5rap1Q8BTW8 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.94■■□□□ 1.26
Cdk5rap1Q8BTW8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cdk5rap1Q8BTW8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cdk5rap1Q8BTW8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cdk5rap1Q8BTW8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Cdk5rap1Q8BTW8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.92■■□□□ 1.26
Cdk5rap1Q8BTW8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms