Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.8■□□□□ 0.6
Nhlrc1Q8BR37 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nhlrc1Q8BR37 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhlrc1Q8BR37 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nhlrc1Q8BR37 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nhlrc1Q8BR37 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhlrc1Q8BR37 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nhlrc1Q8BR37 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.76■□□□□ 0.59
Nhlrc1Q8BR37 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhlrc1Q8BR37 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nhlrc1Q8BR37 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhlrc1Q8BR37 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhlrc1Q8BR37 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nhlrc1Q8BR37 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nhlrc1Q8BR37 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nhlrc1Q8BR37 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhlrc1Q8BR37 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.69■□□□□ 0.58
Nhlrc1Q8BR37 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nhlrc1Q8BR37 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhlrc1Q8BR37 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.68■□□□□ 0.58
Nhlrc1Q8BR37 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nhlrc1Q8BR37 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhlrc1Q8BR37 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Nhlrc1Q8BR37 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.66■□□□□ 0.58
Nhlrc1Q8BR37 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.66■□□□□ 0.58
Nhlrc1Q8BR37 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhlrc1Q8BR37 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhlrc1Q8BR37 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Nhlrc1Q8BR37 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhlrc1Q8BR37 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nhlrc1Q8BR37 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.64■□□□□ 0.57
Nhlrc1Q8BR37 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.64■□□□□ 0.57
Nhlrc1Q8BR37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhlrc1Q8BR37 Gm11599-201ENSMUST00000118720 878 ntBASIC18.62■□□□□ 0.57
Nhlrc1Q8BR37 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.62■□□□□ 0.57
Nhlrc1Q8BR37 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nhlrc1Q8BR37 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhlrc1Q8BR37 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nhlrc1Q8BR37 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nhlrc1Q8BR37 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nhlrc1Q8BR37 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nhlrc1Q8BR37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhlrc1Q8BR37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nhlrc1Q8BR37 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.58■□□□□ 0.57
Nhlrc1Q8BR37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nhlrc1Q8BR37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Nhlrc1Q8BR37 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhlrc1Q8BR37 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nhlrc1Q8BR37 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.55■□□□□ 0.56
Nhlrc1Q8BR37 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhlrc1Q8BR37 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nhlrc1Q8BR37 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhlrc1Q8BR37 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nhlrc1Q8BR37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhlrc1Q8BR37 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Nhlrc1Q8BR37 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nhlrc1Q8BR37 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nhlrc1Q8BR37 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
Nhlrc1Q8BR37 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nhlrc1Q8BR37 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhlrc1Q8BR37 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nhlrc1Q8BR37 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nhlrc1Q8BR37 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nhlrc1Q8BR37 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhlrc1Q8BR37 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nhlrc1Q8BR37 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.49■□□□□ 0.55
Nhlrc1Q8BR37 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhlrc1Q8BR37 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nhlrc1Q8BR37 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.48■□□□□ 0.55
Nhlrc1Q8BR37 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.48■□□□□ 0.55
Nhlrc1Q8BR37 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nhlrc1Q8BR37 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nhlrc1Q8BR37 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nhlrc1Q8BR37 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.46■□□□□ 0.55
Nhlrc1Q8BR37 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.46■□□□□ 0.55
Nhlrc1Q8BR37 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nhlrc1Q8BR37 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nhlrc1Q8BR37 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nhlrc1Q8BR37 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nhlrc1Q8BR37 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.44■□□□□ 0.54
Nhlrc1Q8BR37 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nhlrc1Q8BR37 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nhlrc1Q8BR37 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms