Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.62■□□□□ 0.89
Sox19Q62249 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox19Q62249 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox19Q62249 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Sox19Q62249 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox19Q62249 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox19Q62249 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox19Q62249 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox19Q62249 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox19Q62249 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sox19Q62249 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox19Q62249 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox19Q62249 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox19Q62249 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox19Q62249 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox19Q62249 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox19Q62249 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox19Q62249 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
Sox19Q62249 Peli2-204ENSMUST00000226513 1320 ntBASIC20.55■□□□□ 0.88
Sox19Q62249 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox19Q62249 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox19Q62249 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Sox19Q62249 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox19Q62249 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sox19Q62249 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Sox19Q62249 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox19Q62249 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox19Q62249 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.53■□□□□ 0.88
Sox19Q62249 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sox19Q62249 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox19Q62249 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Sox19Q62249 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox19Q62249 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.51■□□□□ 0.87
Sox19Q62249 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox19Q62249 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sox19Q62249 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sox19Q62249 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sox19Q62249 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox19Q62249 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox19Q62249 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sox19Q62249 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox19Q62249 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sox19Q62249 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox19Q62249 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sox19Q62249 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox19Q62249 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox19Q62249 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox19Q62249 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox19Q62249 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox19Q62249 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox19Q62249 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox19Q62249 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox19Q62249 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox19Q62249 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox19Q62249 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sox19Q62249 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sox19Q62249 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox19Q62249 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Sox19Q62249 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox19Q62249 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sox19Q62249 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox19Q62249 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sox19Q62249 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sox19Q62249 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox19Q62249 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox19Q62249 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sox19Q62249 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sox19Q62249 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Sox19Q62249 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sox19Q62249 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox19Q62249 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox19Q62249 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.38■□□□□ 0.85
Sox19Q62249 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox19Q62249 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Sox19Q62249 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sox19Q62249 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox19Q62249 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox19Q62249 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox19Q62249 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox19Q62249 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox19Q62249 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.35■□□□□ 0.85
Sox19Q62249 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox19Q62249 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox19Q62249 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox19Q62249 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox19Q62249 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox19Q62249 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox19Q62249 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox19Q62249 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox19Q62249 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.33■□□□□ 0.84
Sox19Q62249 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox19Q62249 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox19Q62249 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox19Q62249 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sox19Q62249 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms