Protein–RNA interactions for Protein: Q62035

Ptafr, Platelet-activating factor receptor, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtafrQ62035 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
PtafrQ62035 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PtafrQ62035 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PtafrQ62035 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.45■■□□□ 1.02
PtafrQ62035 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PtafrQ62035 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PtafrQ62035 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtafrQ62035 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PtafrQ62035 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.43■■□□□ 1.02
PtafrQ62035 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PtafrQ62035 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PtafrQ62035 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PtafrQ62035 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtafrQ62035 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtafrQ62035 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.41■■□□□ 1.02
PtafrQ62035 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PtafrQ62035 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.39■■□□□ 1.01
PtafrQ62035 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PtafrQ62035 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PtafrQ62035 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.37■■□□□ 1.01
PtafrQ62035 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PtafrQ62035 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.36■■□□□ 1.01
PtafrQ62035 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtafrQ62035 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtafrQ62035 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.35■■□□□ 1.01
PtafrQ62035 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PtafrQ62035 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtafrQ62035 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
PtafrQ62035 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PtafrQ62035 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PtafrQ62035 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PtafrQ62035 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PtafrQ62035 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PtafrQ62035 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.32■■□□□ 1
PtafrQ62035 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtafrQ62035 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.31■■□□□ 1
PtafrQ62035 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtafrQ62035 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.31■■□□□ 1
PtafrQ62035 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.31■■□□□ 1
PtafrQ62035 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
PtafrQ62035 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.3■■□□□ 1
PtafrQ62035 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PtafrQ62035 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.3■■□□□ 1
PtafrQ62035 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PtafrQ62035 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PtafrQ62035 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtafrQ62035 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtafrQ62035 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PtafrQ62035 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PtafrQ62035 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PtafrQ62035 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PtafrQ62035 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PtafrQ62035 Zxda-201ENSMUST00000117281 2621 ntBASIC21.27■■□□□ 1
PtafrQ62035 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.27■□□□□ 0.99
PtafrQ62035 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.26■□□□□ 0.99
PtafrQ62035 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PtafrQ62035 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PtafrQ62035 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PtafrQ62035 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PtafrQ62035 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PtafrQ62035 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.24■□□□□ 0.99
PtafrQ62035 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PtafrQ62035 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PtafrQ62035 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PtafrQ62035 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PtafrQ62035 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PtafrQ62035 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PtafrQ62035 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PtafrQ62035 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PtafrQ62035 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.21■□□□□ 0.99
PtafrQ62035 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PtafrQ62035 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PtafrQ62035 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PtafrQ62035 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PtafrQ62035 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PtafrQ62035 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PtafrQ62035 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PtafrQ62035 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.18■□□□□ 0.98
PtafrQ62035 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PtafrQ62035 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.18■□□□□ 0.98
PtafrQ62035 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PtafrQ62035 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PtafrQ62035 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.17■□□□□ 0.98
PtafrQ62035 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PtafrQ62035 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PtafrQ62035 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.16■□□□□ 0.98
PtafrQ62035 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.16■□□□□ 0.98
PtafrQ62035 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PtafrQ62035 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PtafrQ62035 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.15■□□□□ 0.98
PtafrQ62035 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PtafrQ62035 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PtafrQ62035 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.15■□□□□ 0.98
PtafrQ62035 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.14■□□□□ 0.98
PtafrQ62035 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PtafrQ62035 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PtafrQ62035 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PtafrQ62035 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PtafrQ62035 Gm7432-201ENSMUST00000210343 879 ntBASIC21.13■□□□□ 0.97
PtafrQ62035 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms