Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Shroom1Q5SX79 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Shroom1Q5SX79 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shroom1Q5SX79 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Shroom1Q5SX79 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.03■■□□□ 1.76
Shroom1Q5SX79 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Shroom1Q5SX79 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shroom1Q5SX79 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.01■■□□□ 1.75
Shroom1Q5SX79 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26■■□□□ 1.75
Shroom1Q5SX79 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Shroom1Q5SX79 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Shroom1Q5SX79 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Shroom1Q5SX79 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.98■■□□□ 1.75
Shroom1Q5SX79 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shroom1Q5SX79 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shroom1Q5SX79 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shroom1Q5SX79 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Shroom1Q5SX79 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.96■■□□□ 1.75
Shroom1Q5SX79 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Shroom1Q5SX79 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.95■■□□□ 1.75
Shroom1Q5SX79 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Shroom1Q5SX79 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Shroom1Q5SX79 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Shroom1Q5SX79 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.94■■□□□ 1.74
Shroom1Q5SX79 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.92■■□□□ 1.74
Shroom1Q5SX79 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shroom1Q5SX79 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom1Q5SX79 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom1Q5SX79 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom1Q5SX79 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Shroom1Q5SX79 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom1Q5SX79 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Shroom1Q5SX79 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom1Q5SX79 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom1Q5SX79 Gm7432-201ENSMUST00000210343 879 ntBASIC25.86■■□□□ 1.73
Shroom1Q5SX79 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom1Q5SX79 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Shroom1Q5SX79 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Shroom1Q5SX79 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Shroom1Q5SX79 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Shroom1Q5SX79 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
Shroom1Q5SX79 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Shroom1Q5SX79 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Shroom1Q5SX79 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Shroom1Q5SX79 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.79■■□□□ 1.72
Shroom1Q5SX79 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.72
Shroom1Q5SX79 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Shroom1Q5SX79 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Shroom1Q5SX79 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.77■■□□□ 1.72
Shroom1Q5SX79 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.77■■□□□ 1.72
Shroom1Q5SX79 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shroom1Q5SX79 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.76■■□□□ 1.71
Shroom1Q5SX79 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shroom1Q5SX79 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shroom1Q5SX79 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.75■■□□□ 1.71
Shroom1Q5SX79 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom1Q5SX79 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shroom1Q5SX79 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom1Q5SX79 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shroom1Q5SX79 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shroom1Q5SX79 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.71■■□□□ 1.71
Shroom1Q5SX79 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Shroom1Q5SX79 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Shroom1Q5SX79 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
Shroom1Q5SX79 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom1Q5SX79 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.68■■□□□ 1.7
Shroom1Q5SX79 Gm11599-201ENSMUST00000118720 878 ntBASIC25.68■■□□□ 1.7
Shroom1Q5SX79 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom1Q5SX79 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.68■■□□□ 1.7
Shroom1Q5SX79 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Shroom1Q5SX79 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Shroom1Q5SX79 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom1Q5SX79 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom1Q5SX79 Amer2-203ENSMUST00000225247 2662 ntBASIC25.67■■□□□ 1.7
Shroom1Q5SX79 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom1Q5SX79 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.66■■□□□ 1.7
Shroom1Q5SX79 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.66■■□□□ 1.7
Shroom1Q5SX79 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom1Q5SX79 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.65■■□□□ 1.7
Shroom1Q5SX79 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
Shroom1Q5SX79 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom1Q5SX79 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom1Q5SX79 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom1Q5SX79 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.61■■□□□ 1.69
Shroom1Q5SX79 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom1Q5SX79 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom1Q5SX79 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Shroom1Q5SX79 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Shroom1Q5SX79 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom1Q5SX79 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms