Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-2Q5R1I4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-2Q5R1I4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-2Q5R1I4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-2Q5R1I4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Trav6-2Q5R1I4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav6-2Q5R1I4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.68■■□□□ 1.06
Trav6-2Q5R1I4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav6-2Q5R1I4 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.68■■□□□ 1.06
Trav6-2Q5R1I4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav6-2Q5R1I4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trav6-2Q5R1I4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav6-2Q5R1I4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Trav6-2Q5R1I4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav6-2Q5R1I4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.66■■□□□ 1.06
Trav6-2Q5R1I4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trav6-2Q5R1I4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav6-2Q5R1I4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav6-2Q5R1I4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.65■■□□□ 1.06
Trav6-2Q5R1I4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trav6-2Q5R1I4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.64■■□□□ 1.05
Trav6-2Q5R1I4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.63■■□□□ 1.05
Trav6-2Q5R1I4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.63■■□□□ 1.05
Trav6-2Q5R1I4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav6-2Q5R1I4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.62■■□□□ 1.05
Trav6-2Q5R1I4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.62■■□□□ 1.05
Trav6-2Q5R1I4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6-2Q5R1I4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav6-2Q5R1I4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav6-2Q5R1I4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trav6-2Q5R1I4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.59■■□□□ 1.05
Trav6-2Q5R1I4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.58■■□□□ 1.04
Trav6-2Q5R1I4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav6-2Q5R1I4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trav6-2Q5R1I4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav6-2Q5R1I4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-2Q5R1I4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-2Q5R1I4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-2Q5R1I4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-2Q5R1I4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-2Q5R1I4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
Trav6-2Q5R1I4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav6-2Q5R1I4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav6-2Q5R1I4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trav6-2Q5R1I4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trav6-2Q5R1I4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trav6-2Q5R1I4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trav6-2Q5R1I4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav6-2Q5R1I4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trav6-2Q5R1I4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav6-2Q5R1I4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-2Q5R1I4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-2Q5R1I4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav6-2Q5R1I4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.49■■□□□ 1.03
Trav6-2Q5R1I4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trav6-2Q5R1I4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.48■■□□□ 1.03
Trav6-2Q5R1I4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trav6-2Q5R1I4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav6-2Q5R1I4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav6-2Q5R1I4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav6-2Q5R1I4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trav6-2Q5R1I4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.45■■□□□ 1.02
Trav6-2Q5R1I4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.45■■□□□ 1.02
Trav6-2Q5R1I4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav6-2Q5R1I4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.44■■□□□ 1.02
Trav6-2Q5R1I4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav6-2Q5R1I4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav6-2Q5R1I4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trav6-2Q5R1I4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.43■■□□□ 1.02
Trav6-2Q5R1I4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.42■■□□□ 1.02
Trav6-2Q5R1I4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav6-2Q5R1I4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trav6-2Q5R1I4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.41■■□□□ 1.02
Trav6-2Q5R1I4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trav6-2Q5R1I4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trav6-2Q5R1I4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav6-2Q5R1I4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trav6-2Q5R1I4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.4■■□□□ 1.02
Trav6-2Q5R1I4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav6-2Q5R1I4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav6-2Q5R1I4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav6-2Q5R1I4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trav6-2Q5R1I4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-2Q5R1I4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.35■■□□□ 1.01
Trav6-2Q5R1I4 Gm30023-201ENSMUST00000197970 889 ntBASIC21.35■■□□□ 1.01
Trav6-2Q5R1I4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trav6-2Q5R1I4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.35■■□□□ 1.01
Trav6-2Q5R1I4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trav6-2Q5R1I4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav6-2Q5R1I4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.33■■□□□ 1.01
Trav6-2Q5R1I4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav6-2Q5R1I4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav6-2Q5R1I4 Particl-201ENSMUST00000205370 1560 ntBASIC21.31■■□□□ 1
Trav6-2Q5R1I4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trav6-2Q5R1I4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms