Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
Smcr8Q3UMB5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Smcr8Q3UMB5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.26■■□□□ 1.79
Smcr8Q3UMB5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smcr8Q3UMB5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.24■■□□□ 1.79
Smcr8Q3UMB5 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smcr8Q3UMB5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smcr8Q3UMB5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smcr8Q3UMB5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Smcr8Q3UMB5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Smcr8Q3UMB5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.2■■□□□ 1.78
Smcr8Q3UMB5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smcr8Q3UMB5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smcr8Q3UMB5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smcr8Q3UMB5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smcr8Q3UMB5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Smcr8Q3UMB5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smcr8Q3UMB5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smcr8Q3UMB5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smcr8Q3UMB5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Smcr8Q3UMB5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smcr8Q3UMB5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smcr8Q3UMB5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smcr8Q3UMB5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smcr8Q3UMB5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smcr8Q3UMB5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smcr8Q3UMB5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Smcr8Q3UMB5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.07■■□□□ 1.76
Smcr8Q3UMB5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smcr8Q3UMB5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smcr8Q3UMB5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Smcr8Q3UMB5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Smcr8Q3UMB5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Smcr8Q3UMB5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Smcr8Q3UMB5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smcr8Q3UMB5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Smcr8Q3UMB5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.01■■□□□ 1.75
Smcr8Q3UMB5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.01■■□□□ 1.75
Smcr8Q3UMB5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
Smcr8Q3UMB5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smcr8Q3UMB5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Gm7432-201ENSMUST00000210343 879 ntBASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smcr8Q3UMB5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smcr8Q3UMB5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smcr8Q3UMB5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Smcr8Q3UMB5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
Smcr8Q3UMB5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.95■■□□□ 1.74
Smcr8Q3UMB5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smcr8Q3UMB5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Smcr8Q3UMB5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Smcr8Q3UMB5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smcr8Q3UMB5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smcr8Q3UMB5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Smcr8Q3UMB5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smcr8Q3UMB5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Smcr8Q3UMB5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Gm11599-201ENSMUST00000118720 878 ntBASIC25.83■■□□□ 1.73
Smcr8Q3UMB5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.83■■□□□ 1.72
Smcr8Q3UMB5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.82■■□□□ 1.72
Smcr8Q3UMB5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms