Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NgfP01139 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NgfP01139 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NgfP01139 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
NgfP01139 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NgfP01139 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NgfP01139 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
NgfP01139 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NgfP01139 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NgfP01139 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NgfP01139 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.01■■□□□ 1.11
NgfP01139 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.01■■□□□ 1.11
NgfP01139 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NgfP01139 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NgfP01139 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NgfP01139 Gm11599-201ENSMUST00000118720 878 ntBASIC22■■□□□ 1.11
NgfP01139 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22■■□□□ 1.11
NgfP01139 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NgfP01139 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.99■■□□□ 1.11
NgfP01139 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.99■■□□□ 1.11
NgfP01139 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.99■■□□□ 1.11
NgfP01139 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NgfP01139 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NgfP01139 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.98■■□□□ 1.11
NgfP01139 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NgfP01139 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.98■■□□□ 1.11
NgfP01139 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
NgfP01139 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.96■■□□□ 1.11
NgfP01139 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NgfP01139 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NgfP01139 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NgfP01139 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NgfP01139 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NgfP01139 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
NgfP01139 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NgfP01139 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NgfP01139 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NgfP01139 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NgfP01139 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.89■■□□□ 1.09
NgfP01139 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NgfP01139 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NgfP01139 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
NgfP01139 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
NgfP01139 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NgfP01139 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NgfP01139 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NgfP01139 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.85■■□□□ 1.09
NgfP01139 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NgfP01139 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.85■■□□□ 1.09
NgfP01139 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NgfP01139 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NgfP01139 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NgfP01139 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NgfP01139 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NgfP01139 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.82■■□□□ 1.08
NgfP01139 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NgfP01139 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NgfP01139 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NgfP01139 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NgfP01139 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.8■■□□□ 1.08
NgfP01139 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.8■■□□□ 1.08
NgfP01139 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NgfP01139 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NgfP01139 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NgfP01139 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.78■■□□□ 1.08
NgfP01139 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.78■■□□□ 1.08
NgfP01139 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NgfP01139 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.77■■□□□ 1.08
NgfP01139 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NgfP01139 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NgfP01139 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NgfP01139 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NgfP01139 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NgfP01139 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NgfP01139 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NgfP01139 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NgfP01139 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NgfP01139 Gm30023-201ENSMUST00000197970 889 ntBASIC21.73■■□□□ 1.07
NgfP01139 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.73■■□□□ 1.07
NgfP01139 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NgfP01139 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NgfP01139 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NgfP01139 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.71■■□□□ 1.07
NgfP01139 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.71■■□□□ 1.07
NgfP01139 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.7■■□□□ 1.06
NgfP01139 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NgfP01139 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.69■■□□□ 1.06
NgfP01139 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.69■■□□□ 1.06
NgfP01139 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NgfP01139 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NgfP01139 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NgfP01139 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NgfP01139 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NgfP01139 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NgfP01139 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NgfP01139 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NgfP01139 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NgfP01139 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NgfP01139 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
NgfP01139 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms