Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.26■■□□□ 1.79
Ttc3O88196 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ttc3O88196 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ttc3O88196 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc3O88196 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc3O88196 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc3O88196 Nkain2-201ENSMUST00000092602 558 ntBASIC26.2■■□□□ 1.79
Ttc3O88196 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ttc3O88196 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ttc3O88196 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Ttc3O88196 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ttc3O88196 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ttc3O88196 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ttc3O88196 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ttc3O88196 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ttc3O88196 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Ttc3O88196 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.17■■□□□ 1.78
Ttc3O88196 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.17■■□□□ 1.78
Ttc3O88196 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Ttc3O88196 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ttc3O88196 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ttc3O88196 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ttc3O88196 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.16■■□□□ 1.78
Ttc3O88196 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ttc3O88196 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
Ttc3O88196 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ttc3O88196 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ttc3O88196 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ttc3O88196 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.11■■□□□ 1.77
Ttc3O88196 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ttc3O88196 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ttc3O88196 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ttc3O88196 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ttc3O88196 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Ttc3O88196 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.09■■□□□ 1.77
Ttc3O88196 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ttc3O88196 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ttc3O88196 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Ttc3O88196 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.07■■□□□ 1.76
Ttc3O88196 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ttc3O88196 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ttc3O88196 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ttc3O88196 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ttc3O88196 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ttc3O88196 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ttc3O88196 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Ttc3O88196 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ttc3O88196 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ttc3O88196 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ttc3O88196 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ttc3O88196 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.02■■□□□ 1.76
Ttc3O88196 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ttc3O88196 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ttc3O88196 Gm7432-201ENSMUST00000210343 879 ntBASIC26■■□□□ 1.75
Ttc3O88196 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ttc3O88196 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.99■■□□□ 1.75
Ttc3O88196 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ttc3O88196 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.99■■□□□ 1.75
Ttc3O88196 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ttc3O88196 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ttc3O88196 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ttc3O88196 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.98■■□□□ 1.75
Ttc3O88196 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.97■■□□□ 1.75
Ttc3O88196 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ttc3O88196 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.75
Ttc3O88196 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ttc3O88196 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Ttc3O88196 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ttc3O88196 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ttc3O88196 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.95■■□□□ 1.74
Ttc3O88196 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.95■■□□□ 1.74
Ttc3O88196 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ttc3O88196 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ttc3O88196 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ttc3O88196 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ttc3O88196 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.93■■□□□ 1.74
Ttc3O88196 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc3O88196 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Ttc3O88196 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ttc3O88196 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.92■■□□□ 1.74
Ttc3O88196 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.91■■□□□ 1.74
Ttc3O88196 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ttc3O88196 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Ttc3O88196 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.9■■□□□ 1.74
Ttc3O88196 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ttc3O88196 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ttc3O88196 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ttc3O88196 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ttc3O88196 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ttc3O88196 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ttc3O88196 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ttc3O88196 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.85■■□□□ 1.73
Ttc3O88196 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ttc3O88196 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ttc3O88196 Gm11599-201ENSMUST00000118720 878 ntBASIC25.84■■□□□ 1.73
Ttc3O88196 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ttc3O88196 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ttc3O88196 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ttc3O88196 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.83■■□□□ 1.73
Ttc3O88196 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms