Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.92■■■□□ 2.86
Ubr1O70481 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ubr1O70481 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Ubr1O70481 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ubr1O70481 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.91■■■□□ 2.86
Ubr1O70481 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Ubr1O70481 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.9■■■□□ 2.86
Ubr1O70481 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ubr1O70481 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.89■■■□□ 2.86
Ubr1O70481 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ubr1O70481 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC32.86■■■□□ 2.85
Ubr1O70481 Gm7432-201ENSMUST00000210343 879 ntBASIC32.86■■■□□ 2.85
Ubr1O70481 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ubr1O70481 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.86■■■□□ 2.85
Ubr1O70481 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
Ubr1O70481 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ubr1O70481 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Ubr1O70481 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ubr1O70481 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ubr1O70481 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Ubr1O70481 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ubr1O70481 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ubr1O70481 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ubr1O70481 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Ubr1O70481 Gm11599-201ENSMUST00000118720 878 ntBASIC32.79■■■□□ 2.84
Ubr1O70481 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Ubr1O70481 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Ubr1O70481 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Ubr1O70481 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ubr1O70481 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ubr1O70481 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.75■■■□□ 2.83
Ubr1O70481 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ubr1O70481 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
Ubr1O70481 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ubr1O70481 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Ubr1O70481 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Ubr1O70481 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
Ubr1O70481 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.7■■■□□ 2.82
Ubr1O70481 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.68■■■□□ 2.82
Ubr1O70481 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Ubr1O70481 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.66■■■□□ 2.82
Ubr1O70481 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ubr1O70481 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC32.66■■■□□ 2.82
Ubr1O70481 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ubr1O70481 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.65■■■□□ 2.82
Ubr1O70481 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.65■■■□□ 2.82
Ubr1O70481 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Ubr1O70481 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Ubr1O70481 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Ubr1O70481 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.63■■■□□ 2.81
Ubr1O70481 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ubr1O70481 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.61■■■□□ 2.81
Ubr1O70481 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
Ubr1O70481 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Ubr1O70481 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ubr1O70481 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ubr1O70481 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.58■■■□□ 2.81
Ubr1O70481 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.58■■■□□ 2.81
Ubr1O70481 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Ubr1O70481 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ubr1O70481 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ubr1O70481 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ubr1O70481 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ubr1O70481 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ubr1O70481 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Ubr1O70481 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
Ubr1O70481 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Ubr1O70481 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Ubr1O70481 Gm30023-201ENSMUST00000197970 889 ntBASIC32.51■■■□□ 2.79
Ubr1O70481 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ubr1O70481 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Ubr1O70481 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr1O70481 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr1O70481 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr1O70481 Gm11175-201ENSMUST00000116172 543 ntBASIC32.5■■■□□ 2.79
Ubr1O70481 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ubr1O70481 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC32.49■■■□□ 2.79
Ubr1O70481 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ubr1O70481 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ubr1O70481 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ubr1O70481 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
Ubr1O70481 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.46■■■□□ 2.79
Ubr1O70481 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Ubr1O70481 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ubr1O70481 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Ubr1O70481 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ubr1O70481 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Ubr1O70481 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ubr1O70481 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
Ubr1O70481 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ubr1O70481 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ubr1O70481 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ubr1O70481 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
Ubr1O70481 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.38■■■□□ 2.77
Ubr1O70481 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ubr1O70481 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ubr1O70481 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.37■■■□□ 2.77
Ubr1O70481 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ubr1O70481 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ubr1O70481 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms