Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Prom1O54990 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■■□□ 2
Prom1O54990 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Prom1O54990 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27,51■■□□□ 1,99
Prom1O54990 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27,49■■□□□ 1,99
Prom1O54990 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27,48■■□□□ 1,99
Prom1O54990 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Prom1O54990 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27,47■■□□□ 1,99
Prom1O54990 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27,45■■□□□ 1,99
Prom1O54990 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27,45■■□□□ 1,98
Prom1O54990 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27,45■■□□□ 1,98
Prom1O54990 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27,45■■□□□ 1,98
Prom1O54990 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27,44■■□□□ 1,98
Prom1O54990 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27,43■■□□□ 1,98
Prom1O54990 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
Prom1O54990 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27,42■■□□□ 1,98
Prom1O54990 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27,42■■□□□ 1,98
Prom1O54990 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27,41■■□□□ 1,98
Prom1O54990 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27,41■■□□□ 1,98
Prom1O54990 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27,41■■□□□ 1,98
Prom1O54990 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27,4■■□□□ 1,98
Prom1O54990 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27,4■■□□□ 1,98
Prom1O54990 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
Prom1O54990 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27,38■■□□□ 1,97
Prom1O54990 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Prom1O54990 Gm11599-201ENSMUST00000118720 878 ntBASIC27,37■■□□□ 1,97
Prom1O54990 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27,37■■□□□ 1,97
Prom1O54990 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Prom1O54990 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27,36■■□□□ 1,97
Prom1O54990 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27,36■■□□□ 1,97
Prom1O54990 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27,36■■□□□ 1,97
Prom1O54990 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27,36■■□□□ 1,97
Prom1O54990 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27,35■■□□□ 1,97
Prom1O54990 Gm6345-201ENSMUST00000180378 1691 ntBASIC27,35■■□□□ 1,97
Prom1O54990 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27,34■■□□□ 1,97
Prom1O54990 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27,34■■□□□ 1,97
Prom1O54990 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27,33■■□□□ 1,97
Prom1O54990 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27,33■■□□□ 1,97
Prom1O54990 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27,32■■□□□ 1,96
Prom1O54990 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27,32■■□□□ 1,96
Prom1O54990 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27,31■■□□□ 1,96
Prom1O54990 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Prom1O54990 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27,31■■□□□ 1,96
Prom1O54990 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27,3■■□□□ 1,96
Prom1O54990 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27,28■■□□□ 1,96
Prom1O54990 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27,27■■□□□ 1,96
Prom1O54990 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27,27■■□□□ 1,96
Prom1O54990 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27,26■■□□□ 1,95
Prom1O54990 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27,25■■□□□ 1,95
Prom1O54990 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27,25■■□□□ 1,95
Prom1O54990 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Prom1O54990 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27,23■■□□□ 1,95
Prom1O54990 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27,22■■□□□ 1,95
Prom1O54990 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Prom1O54990 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27,2■■□□□ 1,95
Prom1O54990 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27,2■■□□□ 1,95
Prom1O54990 Gm11175-201ENSMUST00000116172 543 ntBASIC27,19■■□□□ 1,94
Prom1O54990 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27,19■■□□□ 1,94
Prom1O54990 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27,18■■□□□ 1,94
Prom1O54990 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Prom1O54990 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Prom1O54990 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27,17■■□□□ 1,94
Prom1O54990 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27,17■■□□□ 1,94
Prom1O54990 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27,17■■□□□ 1,94
Prom1O54990 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
Prom1O54990 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27,17■■□□□ 1,94
Prom1O54990 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27,17■■□□□ 1,94
Prom1O54990 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27,17■■□□□ 1,94
Prom1O54990 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27,16■■□□□ 1,94
Prom1O54990 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27,16■■□□□ 1,94
Prom1O54990 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27,16■■□□□ 1,94
Prom1O54990 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27,15■■□□□ 1,94
Prom1O54990 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27,15■■□□□ 1,94
Prom1O54990 Gm30023-201ENSMUST00000197970 889 ntBASIC27,14■■□□□ 1,94
Prom1O54990 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27,13■■□□□ 1,93
Prom1O54990 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27,11■■□□□ 1,93
Prom1O54990 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Prom1O54990 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Prom1O54990 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27,09■■□□□ 1,93
Prom1O54990 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Prom1O54990 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27,08■■□□□ 1,93
Prom1O54990 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27,08■■□□□ 1,92
Prom1O54990 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,07■■□□□ 1,92
Prom1O54990 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27,07■■□□□ 1,92
Prom1O54990 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Prom1O54990 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27,07■■□□□ 1,92
Prom1O54990 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27,06■■□□□ 1,92
Prom1O54990 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27,06■■□□□ 1,92
Prom1O54990 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27,06■■□□□ 1,92
Prom1O54990 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Prom1O54990 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27,05■■□□□ 1,92
Prom1O54990 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Prom1O54990 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Prom1O54990 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27,03■■□□□ 1,92
Prom1O54990 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27,03■■□□□ 1,92
Retrieved 100 of 76,532 protein–RNA pairs in 19,3 ms