Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sh2b3O09039 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2b3O09039 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh2b3O09039 Amer2-203ENSMUST00000225247 2662 ntBASIC21.53■■□□□ 1.04
Sh2b3O09039 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2b3O09039 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2b3O09039 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2b3O09039 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2b3O09039 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.51■■□□□ 1.03
Sh2b3O09039 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sh2b3O09039 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh2b3O09039 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh2b3O09039 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2b3O09039 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2b3O09039 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2b3O09039 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh2b3O09039 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2b3O09039 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.49■■□□□ 1.03
Sh2b3O09039 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh2b3O09039 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.49■■□□□ 1.03
Sh2b3O09039 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh2b3O09039 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh2b3O09039 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.47■■□□□ 1.03
Sh2b3O09039 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.47■■□□□ 1.03
Sh2b3O09039 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh2b3O09039 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh2b3O09039 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sh2b3O09039 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh2b3O09039 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh2b3O09039 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2b3O09039 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2b3O09039 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2b3O09039 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh2b3O09039 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh2b3O09039 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.44■■□□□ 1.02
Sh2b3O09039 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.44■■□□□ 1.02
Sh2b3O09039 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh2b3O09039 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.44■■□□□ 1.02
Sh2b3O09039 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Sh2b3O09039 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh2b3O09039 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh2b3O09039 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh2b3O09039 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh2b3O09039 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sh2b3O09039 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh2b3O09039 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sh2b3O09039 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sh2b3O09039 Nkain2-201ENSMUST00000092602 558 ntBASIC21.4■■□□□ 1.02
Sh2b3O09039 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh2b3O09039 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Sh2b3O09039 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh2b3O09039 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.39■■□□□ 1.01
Sh2b3O09039 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Sh2b3O09039 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Sh2b3O09039 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2b3O09039 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2b3O09039 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2b3O09039 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.38■■□□□ 1.01
Sh2b3O09039 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2b3O09039 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2b3O09039 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2b3O09039 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2b3O09039 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sh2b3O09039 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2b3O09039 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2b3O09039 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2b3O09039 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sh2b3O09039 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2b3O09039 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2b3O09039 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2b3O09039 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2b3O09039 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2b3O09039 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2b3O09039 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.31■■□□□ 1
Sh2b3O09039 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2b3O09039 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.31■■□□□ 1
Sh2b3O09039 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2b3O09039 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2b3O09039 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2b3O09039 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh2b3O09039 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.28■■□□□ 1
Sh2b3O09039 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2b3O09039 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2b3O09039 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh2b3O09039 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh2b3O09039 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Sh2b3O09039 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh2b3O09039 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sh2b3O09039 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.26■□□□□ 0.99
Sh2b3O09039 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2b3O09039 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2b3O09039 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2b3O09039 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2b3O09039 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2b3O09039 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2b3O09039 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2b3O09039 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.23■□□□□ 0.99
Sh2b3O09039 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2b3O09039 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2b3O09039 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms