Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.8■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.77■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.74■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.73■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.71■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ighv1-43A0A0A6YXN5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
Ighv1-43A0A0A6YXN5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.7■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ighv1-43A0A0A6YXN5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.69■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv1-43A0A0A6YXN5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ighv1-43A0A0A6YXN5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.65■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Ighv1-43A0A0A6YXN5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.64■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.62■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv1-43A0A0A6YXN5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.61■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.61■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-43A0A0A6YXN5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv1-43A0A0A6YXN5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ighv1-43A0A0A6YXN5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.55■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Gm7432-201ENSMUST00000210343 879 ntBASIC22.55■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.55■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Zxda-201ENSMUST00000117281 2621 ntBASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ighv1-43A0A0A6YXN5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-43A0A0A6YXN5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.5■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.48■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.48■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.47■■□□□ 1.19
Ighv1-43A0A0A6YXN5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ighv1-43A0A0A6YXN5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ighv1-43A0A0A6YXN5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.45■■□□□ 1.18
Ighv1-43A0A0A6YXN5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ighv1-43A0A0A6YXN5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms