Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav16A0A075B653 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav16A0A075B653 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav16A0A075B653 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav16A0A075B653 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav16A0A075B653 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav16A0A075B653 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16A0A075B653 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav16A0A075B653 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16A0A075B653 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav16A0A075B653 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav16A0A075B653 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav16A0A075B653 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav16A0A075B653 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav16A0A075B653 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav16A0A075B653 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16A0A075B653 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16A0A075B653 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16A0A075B653 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16A0A075B653 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Trav16A0A075B653 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trav16A0A075B653 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav16A0A075B653 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav16A0A075B653 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav16A0A075B653 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav16A0A075B653 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav16A0A075B653 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav16A0A075B653 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav16A0A075B653 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Trav16A0A075B653 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16A0A075B653 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16A0A075B653 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16A0A075B653 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16A0A075B653 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav16A0A075B653 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16A0A075B653 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16A0A075B653 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16A0A075B653 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16A0A075B653 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav16A0A075B653 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav16A0A075B653 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trav16A0A075B653 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav16A0A075B653 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav16A0A075B653 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.44■□□□□ 0.54
Trav16A0A075B653 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav16A0A075B653 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav16A0A075B653 Peli2-204ENSMUST00000226513 1320 ntBASIC18.44■□□□□ 0.54
Trav16A0A075B653 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav16A0A075B653 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav16A0A075B653 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16A0A075B653 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16A0A075B653 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16A0A075B653 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav16A0A075B653 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16A0A075B653 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav16A0A075B653 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Trav16A0A075B653 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav16A0A075B653 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Trav16A0A075B653 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav16A0A075B653 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav16A0A075B653 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav16A0A075B653 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav16A0A075B653 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav16A0A075B653 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav16A0A075B653 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav16A0A075B653 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav16A0A075B653 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.37■□□□□ 0.53
Trav16A0A075B653 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav16A0A075B653 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Trav16A0A075B653 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav16A0A075B653 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav16A0A075B653 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav16A0A075B653 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16A0A075B653 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trav16A0A075B653 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
Trav16A0A075B653 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.34■□□□□ 0.53
Trav16A0A075B653 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav16A0A075B653 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav16A0A075B653 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav16A0A075B653 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav16A0A075B653 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav16A0A075B653 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16A0A075B653 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms