Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC009090.4-201ENST00000623921 3691 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RPL32-201ENST00000273223 567 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RNASE1-201ENST00000340900 878 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 INIP-201ENST00000374234 713 ntTSL 2 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 VN1R11P-201ENST00000407795 868 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 PHBP7-201ENST00000415677 814 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AP002381.1-201ENST00000439829 615 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 MTND6P21-201ENST00000443620 482 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC092634.4-203ENST00000451395 448 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 DEFA10P-201ENST00000455014 288 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RPL5P29-201ENST00000482972 894 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 IGKV3-25-201ENST00000523155 253 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AP003122.1-201ENST00000527402 755 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 IGKV2D-28-202ENST00000558026 306 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC009101.2-202ENST00000564851 490 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RN7SL138P-201ENST00000577405 287 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AL645949.1-202ENST00000600073 242 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AL122127.1-201ENST00000603832 327 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC009053.4-201ENST00000614366 108 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 NHS-204ENST00000615422 8860 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 BTN2A3P-201ENST00000377662 1836 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RN7SKP173-201ENST00000362821 315 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 ZNF839P1-201ENST00000403487 861 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RN7SKP154-201ENST00000410136 290 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RPL21P107-201ENST00000411449 460 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RPSAP76-201ENST00000444599 853 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 UGT1A11P-201ENST00000456635 849 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AMD1P3-201ENST00000508874 994 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RPS3-207ENST00000526608 710 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 XIAPP2-201ENST00000527404 1852 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC9.35□□□□□ -0.91
LMO3Q8TAP4 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 POU3F4-201ENST00000373200 3878 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
LMO3Q8TAP4 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC012360.3-201ENST00000610036 3449 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms