Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC055716.2-201ENST00000552545 2441 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 RN7SKP204-201ENST00000365481 310 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 CARM1P1-201ENST00000426329 1185 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC004006.1-201ENST00000434994 377 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 RPE-207ENST00000435437 858 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 MRPS27-207ENST00000515404 1183 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AP005435.2-201ENST00000525489 590 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 SCAND2P-204ENST00000541103 669 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AL355989.2-201ENST00000603304 512 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC104794.4-201ENST00000607181 446 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC010332.1-201ENST00000620439 97 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AL139351.1-201ENST00000622092 320 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AC005086.2-201ENST00000624939 228 ntBASIC9.4□□□□□ -0.9
LMO3Q8TAP4 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
LMO3Q8TAP4 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 IDSP1-201ENST00000324799 376 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 MIR25-201ENST00000384816 84 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC084880.1-201ENST00000392530 545 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC006355.1-201ENST00000440982 1012 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 OR11Q1P-201ENST00000451582 877 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC092610.1-201ENST00000454916 373 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 MEF2C-AS1-203ENST00000508718 483 ntTSL 4 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 BRIX1P1-201ENST00000521785 908 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 ZNF123P-201ENST00000531501 1196 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 NPM1P50-201ENST00000532878 867 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 VN1R67P-201ENST00000568379 913 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AC005185.1-201ENST00000604248 787 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 Metazoa_SRP.155-201ENST00000616367 282 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 AL391987.5-201ENST00000618472 412 ntBASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC9.39□□□□□ -0.91
LMO3Q8TAP4 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 SPATA31E3P-201ENST00000613133 4214 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms