Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 AC092720.2-201ENST00000602388 1665 ntBASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 AC239859.2-201ENST00000444165 318 ntBASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.69■□□□□ 0.26
RCL1Q9Y2P8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 AC125437.2-201ENST00000625180 2167 ntBASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 AP005435.1-201ENST00000529293 1178 ntBASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 AL158211.5-201ENST00000623583 2518 ntBASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCL1Q9Y2P8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCL1Q9Y2P8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 AIRN-201ENST00000601203 4374 ntBASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 AC011484.1-201ENST00000377652 1995 ntBASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 AP000974.1-201ENST00000623909 2387 ntBASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RCL1Q9Y2P8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 UNC93B8-201ENST00000511903 705 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms