Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC138907.5-202ENST00000569484 235 ntBASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 AC092720.2-201ENST00000602388 1665 ntBASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 AC245052.3-201ENST00000450182 901 ntBASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP2BQ9UQN3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 KRT16P2-201ENST00000414673 1423 ntBASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2BQ9UQN3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2BQ9UQN3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
CHMP2BQ9UQN3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP2BQ9UQN3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 AC010141.2-201ENST00000452426 721 ntBASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 AC105265.2-201ENST00000467189 838 ntBASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
CHMP2BQ9UQN3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 IRS3P-201ENST00000223076 1006 ntBASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHMP2BQ9UQN3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 AC120498.10-201ENST00000621827 505 ntBASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms