Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4E1Q9UPM8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 LINC01006-201ENST00000333319 2292 ntBASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 AC007322.1-201ENST00000426983 750 ntBASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 AP005212.1-201ENST00000581547 1997 ntBASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
AP4E1Q9UPM8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 AC080038.1-201ENST00000611274 1154 ntBASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.23■□□□□ 0.99
AP4E1Q9UPM8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 CYP2T1P-201ENST00000432607 1285 ntBASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.22■□□□□ 0.99
AP4E1Q9UPM8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 AC092667.1-201ENST00000434301 2586 ntBASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 AC073111.5-205ENST00000641717 521 ntBASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4E1Q9UPM8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
AP4E1Q9UPM8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
AP4E1Q9UPM8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4E1Q9UPM8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4E1Q9UPM8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms