Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR3Q9UNL2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR3Q9UNL2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR3Q9UNL2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR3Q9UNL2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SSR3Q9UNL2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 AL158211.5-201ENST00000623583 2518 ntBASIC18.21■□□□□ 0.51
SSR3Q9UNL2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
SSR3Q9UNL2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 AC004408.2-201ENST00000623613 2777 ntBASIC18.2■□□□□ 0.5
SSR3Q9UNL2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSR3Q9UNL2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 AC011484.1-201ENST00000377652 1995 ntBASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 MIR3181-201ENST00000578512 73 ntBASIC18.19■□□□□ 0.5
SSR3Q9UNL2 AC010525.1-201ENST00000585559 441 ntBASIC18.19■□□□□ 0.5
SSR3Q9UNL2 AC099791.2-201ENST00000605725 427 ntBASIC18.19■□□□□ 0.5
SSR3Q9UNL2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR3Q9UNL2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR3Q9UNL2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms