Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
APPL1Q9UKG1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APPL1Q9UKG1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 TERF1P5-201ENST00000477545 1207 ntBASIC20.66■□□□□ 0.9
APPL1Q9UKG1 AC083906.2-201ENST00000511578 360 ntBASIC20.66■□□□□ 0.9
APPL1Q9UKG1 AC142086.2-201ENST00000569753 217 ntBASIC20.66■□□□□ 0.9
APPL1Q9UKG1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APPL1Q9UKG1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 TSPY6P-201ENST00000448518 926 ntBASIC20.65■□□□□ 0.9
APPL1Q9UKG1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APPL1Q9UKG1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.64■□□□□ 0.9
APPL1Q9UKG1 CNN2P6-201ENST00000439038 900 ntBASIC20.64■□□□□ 0.89
APPL1Q9UKG1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
APPL1Q9UKG1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APPL1Q9UKG1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APPL1Q9UKG1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APPL1Q9UKG1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APPL1Q9UKG1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 AC091799.1-201ENST00000422823 811 ntBASIC20.63■□□□□ 0.89
APPL1Q9UKG1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 AC121338.2-201ENST00000622535 1744 ntBASIC20.63■□□□□ 0.89
APPL1Q9UKG1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
APPL1Q9UKG1 AL157384.1-201ENST00000445995 2473 ntBASIC20.63■□□□□ 0.89
APPL1Q9UKG1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 AC116050.2-201ENST00000612102 1779 ntBASIC20.62■□□□□ 0.89
APPL1Q9UKG1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 AC013268.1-206ENST00000638368 961 ntBASIC20.62■□□□□ 0.89
APPL1Q9UKG1 AC112229.1-201ENST00000639295 961 ntBASIC20.62■□□□□ 0.89
APPL1Q9UKG1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
APPL1Q9UKG1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms