Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 AC007322.3-201ENST00000426526 701 ntBASIC20.69■□□□□ 0.9
MBD1Q9UIS9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 SOX15-203ENST00000570788 1093 ntBASIC20.69■□□□□ 0.9
MBD1Q9UIS9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 Z99916.2-201ENST00000604037 246 ntBASIC20.69■□□□□ 0.9
MBD1Q9UIS9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD1Q9UIS9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 MIR718-201ENST00000390190 70 ntBASIC20.68■□□□□ 0.9
MBD1Q9UIS9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 MIR4497-201ENST00000583208 89 ntBASIC20.68■□□□□ 0.9
MBD1Q9UIS9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD1Q9UIS9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.67■□□□□ 0.9
MBD1Q9UIS9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.67■□□□□ 0.9
MBD1Q9UIS9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 AC069544.1-201ENST00000609399 999 ntBASIC20.67■□□□□ 0.9
MBD1Q9UIS9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 AL137060.1-201ENST00000618151 2648 ntBASIC20.67■□□□□ 0.9
MBD1Q9UIS9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD1Q9UIS9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MBD1Q9UIS9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 CYP21A1P-202ENST00000354927 1481 ntBASIC20.65■□□□□ 0.9
MBD1Q9UIS9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD1Q9UIS9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms