Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 FAM99A-202ENST00000538190 1989 ntBASIC20.85■□□□□ 0.93
EBF1Q9UH73 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.84■□□□□ 0.93
EBF1Q9UH73 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.84■□□□□ 0.93
EBF1Q9UH73 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EBF1Q9UH73 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EBF1Q9UH73 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EBF1Q9UH73 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EBF1Q9UH73 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EBF1Q9UH73 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EBF1Q9UH73 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.83■□□□□ 0.93
EBF1Q9UH73 Z99916.2-201ENST00000604037 246 ntBASIC20.83■□□□□ 0.93
EBF1Q9UH73 AC073912.3-201ENST00000624414 853 ntBASIC20.83■□□□□ 0.93
EBF1Q9UH73 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
EBF1Q9UH73 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EBF1Q9UH73 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.83■□□□□ 0.92
EBF1Q9UH73 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AC073130.3-201ENST00000624389 2278 ntBASIC20.82■□□□□ 0.92
EBF1Q9UH73 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AC007322.3-201ENST00000426526 701 ntBASIC20.82■□□□□ 0.92
EBF1Q9UH73 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.82■□□□□ 0.92
EBF1Q9UH73 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EBF1Q9UH73 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EBF1Q9UH73 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.81■□□□□ 0.92
EBF1Q9UH73 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EBF1Q9UH73 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms