Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.98■■□□□ 1.59
ECHDC1Q9NTX5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.98■■□□□ 1.59
ECHDC1Q9NTX5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 AC083906.2-201ENST00000511578 360 ntBASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 CYP2T3P-201ENST00000601990 817 ntBASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
ECHDC1Q9NTX5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 AL355472.2-201ENST00000422958 438 ntBASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ECHDC1Q9NTX5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
ECHDC1Q9NTX5 KRT8P36-201ENST00000489121 1440 ntBASIC24.95■■□□□ 1.59
ECHDC1Q9NTX5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ECHDC1Q9NTX5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 PGM5P4-201ENST00000421970 445 ntBASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 AL356652.1-201ENST00000615962 565 ntBASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 MKRN4P-201ENST00000444706 1521 ntBASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ECHDC1Q9NTX5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 KRT18P68-201ENST00000392293 1000 ntBASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 GUSBP6-202ENST00000438529 1198 ntBASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 FEM1AP1-201ENST00000431297 1995 ntBASIC24.93■■□□□ 1.58
ECHDC1Q9NTX5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms