Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.85■■□□□ 1.09
CISHQ9NSE2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 AF201337.1-201ENST00000520239 748 ntBASIC21.85■■□□□ 1.09
CISHQ9NSE2 AC105036.2-201ENST00000569468 176 ntBASIC21.85■■□□□ 1.09
CISHQ9NSE2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.85■■□□□ 1.09
CISHQ9NSE2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
CISHQ9NSE2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CISHQ9NSE2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CISHQ9NSE2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CISHQ9NSE2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CISHQ9NSE2 AC087633.2-202ENST00000565166 1439 ntBASIC21.84■■□□□ 1.09
CISHQ9NSE2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CISHQ9NSE2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CISHQ9NSE2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CISHQ9NSE2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.83■■□□□ 1.09
CISHQ9NSE2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CISHQ9NSE2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CISHQ9NSE2 NCF1B-203ENST00000435988 1254 ntBASIC21.83■■□□□ 1.09
CISHQ9NSE2 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.83■■□□□ 1.09
CISHQ9NSE2 AC083906.2-201ENST00000511578 360 ntBASIC21.83■■□□□ 1.09
CISHQ9NSE2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.83■■□□□ 1.09
CISHQ9NSE2 AL121832.2-201ENST00000610979 668 ntBASIC21.83■■□□□ 1.09
CISHQ9NSE2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.83■■□□□ 1.09
CISHQ9NSE2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CISHQ9NSE2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CISHQ9NSE2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CISHQ9NSE2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CISHQ9NSE2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.83■■□□□ 1.08
CISHQ9NSE2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CISHQ9NSE2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 AL355472.2-201ENST00000422958 438 ntBASIC21.82■■□□□ 1.08
CISHQ9NSE2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.82■■□□□ 1.08
CISHQ9NSE2 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.82■■□□□ 1.08
CISHQ9NSE2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CISHQ9NSE2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CISHQ9NSE2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 KRT8P36-201ENST00000489121 1440 ntBASIC21.81■■□□□ 1.08
CISHQ9NSE2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 CYP2T3P-201ENST00000601990 817 ntBASIC21.81■■□□□ 1.08
CISHQ9NSE2 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.81■■□□□ 1.08
CISHQ9NSE2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CISHQ9NSE2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CISHQ9NSE2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CISHQ9NSE2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CISHQ9NSE2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CISHQ9NSE2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CISHQ9NSE2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CISHQ9NSE2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms