Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.34■□□□□ 0.85
SNX15Q9NRS6 AC116050.2-201ENST00000612102 1779 ntBASIC20.34■□□□□ 0.85
SNX15Q9NRS6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX15Q9NRS6 AC104187.1-201ENST00000607510 612 ntBASIC20.33■□□□□ 0.85
SNX15Q9NRS6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX15Q9NRS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L2-201ENST00000561772 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L6-201ENST00000626483 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L1-201ENST00000627662 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L8-201ENST00000629013 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L3-201ENST00000630187 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L7-201ENST00000630678 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DUX4L5-201ENST00000630834 1275 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 MIR2861-201ENST00000636310 90 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 LINC02228-203ENST00000641970 1355 ntBASIC20.32■□□□□ 0.84
SNX15Q9NRS6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX15Q9NRS6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 TCF3P1-201ENST00000423021 1937 ntBASIC20.31■□□□□ 0.84
SNX15Q9NRS6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX15Q9NRS6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 AP001160.3-201ENST00000601484 763 ntBASIC20.3■□□□□ 0.84
SNX15Q9NRS6 AC007952.6-201ENST00000573168 2673 ntBASIC20.3■□□□□ 0.84
SNX15Q9NRS6 AC003957.1-201ENST00000625108 2673 ntBASIC20.3■□□□□ 0.84
SNX15Q9NRS6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX15Q9NRS6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX15Q9NRS6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms