Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF304Q9HCX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF304Q9HCX3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 MYC-209ENST00000641252 345 ntBASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF304Q9HCX3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 AL049796.1-201ENST00000565336 1766 ntBASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF304Q9HCX3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF304Q9HCX3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
ZNF304Q9HCX3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
ZNF304Q9HCX3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF304Q9HCX3 AC011484.1-201ENST00000377652 1995 ntBASIC19.39■□□□□ 0.7
ZNF304Q9HCX3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF304Q9HCX3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF304Q9HCX3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF304Q9HCX3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF304Q9HCX3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF304Q9HCX3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms