Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 AC007322.4-201ENST00000509611 723 ntBASIC17.29■□□□□ 0.36
HES4Q9HCC6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 SLC25A24-204ENST00000569674 2357 ntBASIC17.29■□□□□ 0.36
HES4Q9HCC6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HES4Q9HCC6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HES4Q9HCC6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 CDV3P1-201ENST00000471403 739 ntBASIC17.28■□□□□ 0.36
HES4Q9HCC6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 MFSD11-216ENST00000590393 1141 ntBASIC17.28■□□□□ 0.36
HES4Q9HCC6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 AC073314.1-201ENST00000568729 2216 ntBASIC17.28■□□□□ 0.36
HES4Q9HCC6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HES4Q9HCC6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HES4Q9HCC6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HES4Q9HCC6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.27■□□□□ 0.36
HES4Q9HCC6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
HES4Q9HCC6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HES4Q9HCC6 AL162412.1-201ENST00000567129 965 ntBASIC17.27■□□□□ 0.36
HES4Q9HCC6 MIR2861-201ENST00000636310 90 ntBASIC17.27■□□□□ 0.36
HES4Q9HCC6 AC013268.1-206ENST00000638368 961 ntBASIC17.27■□□□□ 0.36
HES4Q9HCC6 AC112229.1-201ENST00000639295 961 ntBASIC17.27■□□□□ 0.36
HES4Q9HCC6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.27■□□□□ 0.35
HES4Q9HCC6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HES4Q9HCC6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.27■□□□□ 0.35
HES4Q9HCC6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 AC016769.1-201ENST00000409132 1010 ntBASIC17.26■□□□□ 0.35
HES4Q9HCC6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 FAM21FP-204ENST00000608637 956 ntBASIC17.26■□□□□ 0.35
HES4Q9HCC6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HES4Q9HCC6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HES4Q9HCC6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HES4Q9HCC6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
HES4Q9HCC6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HES4Q9HCC6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HES4Q9HCC6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HES4Q9HCC6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.25■□□□□ 0.35
HES4Q9HCC6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.25■□□□□ 0.35
HES4Q9HCC6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HES4Q9HCC6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HES4Q9HCC6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms