Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SND1-IT1Q9HBX3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SND1-IT1Q9HBX3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 BX323043.1-201ENST00000641006 1765 ntBASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SND1-IT1Q9HBX3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 AL512408.1-201ENST00000569378 2000 ntBASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms