Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 AC027702.1-201ENST00000563810 1770 ntBASIC21.02■□□□□ 0.96
TRABDQ9H4I3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.02■□□□□ 0.96
TRABDQ9H4I3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.02■□□□□ 0.95
TRABDQ9H4I3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.02■□□□□ 0.95
TRABDQ9H4I3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 AL162430.1-201ENST00000480705 870 ntBASIC21.01■□□□□ 0.95
TRABDQ9H4I3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TRABDQ9H4I3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 SLC7A5P1-201ENST00000568957 537 ntBASIC21■□□□□ 0.95
TRABDQ9H4I3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRABDQ9H4I3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 AC121338.2-201ENST00000622535 1744 ntBASIC20.99■□□□□ 0.95
TRABDQ9H4I3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRABDQ9H4I3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.98■□□□□ 0.95
TRABDQ9H4I3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRABDQ9H4I3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRABDQ9H4I3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 AC020907.5-201ENST00000624372 1936 ntBASIC20.96■□□□□ 0.95
TRABDQ9H4I3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 KRT18P11-201ENST00000435214 1283 ntBASIC20.96■□□□□ 0.95
TRABDQ9H4I3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRABDQ9H4I3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms