Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 AC011298.3-201ENST00000615796 283 ntBASIC16.54■□□□□ 0.24
RAB40CQ96S21 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 AC116562.4-201ENST00000641316 2276 ntBASIC16.54■□□□□ 0.24
RAB40CQ96S21 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40CQ96S21 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB40CQ96S21 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 SERBP1P1-201ENST00000396021 1160 ntBASIC16.53■□□□□ 0.24
RAB40CQ96S21 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 AL512631.2-201ENST00000604634 923 ntBASIC16.53■□□□□ 0.24
RAB40CQ96S21 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40CQ96S21 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40CQ96S21 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RAB40CQ96S21 AC055733.4-201ENST00000638462 1354 ntBASIC16.52■□□□□ 0.24
RAB40CQ96S21 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40CQ96S21 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40CQ96S21 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40CQ96S21 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.52■□□□□ 0.24
RAB40CQ96S21 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40CQ96S21 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms