Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HIST1H2AAQ96QV6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H2AAQ96QV6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 RNF165-205ENST00000588679 2904 ntBASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 AC097381.1-201ENST00000429019 1296 ntBASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 RARRES2P11-201ENST00000635158 484 ntBASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H2AAQ96QV6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 SLC7A5P1-201ENST00000568957 537 ntBASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 NTF6G-201ENST00000591094 616 ntBASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST1H2AAQ96QV6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 MIR6821-201ENST00000617625 74 ntBASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms