Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP1S3Q96PC3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 pRNA.6-201ENST00000610482 90 ntBASIC15.41■□□□□ 0.06
AP1S3Q96PC3 pRNA.5-201ENST00000612139 90 ntBASIC15.41■□□□□ 0.06
AP1S3Q96PC3 pRNA.11-201ENST00000618423 90 ntBASIC15.41■□□□□ 0.06
AP1S3Q96PC3 pRNA.13-201ENST00000619112 90 ntBASIC15.41■□□□□ 0.06
AP1S3Q96PC3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.41■□□□□ 0.06
AP1S3Q96PC3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.4■□□□□ 0.06
AP1S3Q96PC3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.4■□□□□ 0.06
AP1S3Q96PC3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
AP1S3Q96PC3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP1S3Q96PC3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms