Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CASD1Q96PB1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CASD1Q96PB1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CASD1Q96PB1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CASD1Q96PB1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CASD1Q96PB1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.96■■□□□ 1.11
CASD1Q96PB1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.11
CASD1Q96PB1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 AC233702.5-201ENST00000584107 538 ntBASIC21.95■■□□□ 1.1
CASD1Q96PB1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.95■■□□□ 1.1
CASD1Q96PB1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CASD1Q96PB1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 RPS2P55-201ENST00000397318 883 ntBASIC21.94■■□□□ 1.1
CASD1Q96PB1 AL390719.1-204ENST00000412397 1219 ntBASIC21.94■■□□□ 1.1
CASD1Q96PB1 AC012618.2-201ENST00000428058 849 ntBASIC21.94■■□□□ 1.1
CASD1Q96PB1 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.94■■□□□ 1.1
CASD1Q96PB1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 AC107956.1-201ENST00000494359 873 ntBASIC21.94■■□□□ 1.1
CASD1Q96PB1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CASD1Q96PB1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CASD1Q96PB1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CASD1Q96PB1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms