Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 AC233263.1-201ENST00000578059 224 ntBASIC20.57■□□□□ 0.88
SIPA1Q96FS4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.57■□□□□ 0.88
SIPA1Q96FS4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIPA1Q96FS4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 AL356652.1-201ENST00000615962 565 ntBASIC20.55■□□□□ 0.88
SIPA1Q96FS4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
SIPA1Q96FS4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 MIR718-201ENST00000390190 70 ntBASIC20.54■□□□□ 0.88
SIPA1Q96FS4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIPA1Q96FS4 CLDN5-201ENST00000403084 2357 ntBASIC20.53■□□□□ 0.88
SIPA1Q96FS4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SIPA1Q96FS4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms