Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLIP3Q96DZ5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 MIR4651-201ENST00000582622 73 ntBASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLIP3Q96DZ5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.66■□□□□ 0.74
CLIP3Q96DZ5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 AC007322.3-201ENST00000426526 701 ntBASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 DUSP5P2-201ENST00000426873 1033 ntBASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLIP3Q96DZ5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLIP3Q96DZ5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLIP3Q96DZ5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.64■□□□□ 0.74
CLIP3Q96DZ5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 AL355472.2-201ENST00000422958 438 ntBASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 AC091874.3-201ENST00000512672 1195 ntBASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLIP3Q96DZ5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLIP3Q96DZ5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLIP3Q96DZ5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms