Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 PRKY-204ENST00000533551 1019 ntBASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP40Q96DI7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 AL390719.1-204ENST00000412397 1219 ntBASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 PGM5P4-201ENST00000421970 445 ntBASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 RARRES2P10-201ENST00000564312 460 ntBASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 C1orf229-201ENST00000623686 2258 ntBASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP40Q96DI7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 AL355075.4-201ENST00000554988 638 ntBASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 AC097493.4-201ENST00000641197 219 ntBASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP40Q96DI7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SNRNP40Q96DI7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SNRNP40Q96DI7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms