Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC012414.1-201ENST00000556676 535 ntBASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 AL136967.2-201ENST00000623968 743 ntBASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 AL031432.3-201ENST00000607698 485 ntBASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.95■□□□□ 0.46
DNAAF1Q8NEP3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 AL162377.1-201ENST00000618844 1793 ntBASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 AC099778.1-201ENST00000568593 1911 ntBASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.94■□□□□ 0.46
DNAAF1Q8NEP3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 AL354811.1-201ENST00000610286 706 ntBASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNAAF1Q8NEP3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 SUDS3P1-201ENST00000505831 966 ntBASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.92■□□□□ 0.46
DNAAF1Q8NEP3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.91■□□□□ 0.46
DNAAF1Q8NEP3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.91■□□□□ 0.46
DNAAF1Q8NEP3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms